Exhibit 99.2

© 2024 Scholar Rock, Inc. All rights reserved. Forward-Looking Statements Various statements in this presentation concerning the future expectations, plans and prospects of Scholar Rock Holding Corporation and Scholar Rock, Inc. (collectively, “Scholar Rock”), including without limitation, Scholar Rock’s expectations regarding its strategy, its product candidate selection and development timing, including timing for the initiation of and reporting results from its preclinical studies and clinical trials for SRK-439, apitegromab, SRK-181, and other product candidates and indication selection and development timing, its cash runway, the ability of any product candidate to perform in humans in a manner consistent with earlier nonclinical, preclinical or clinical trial data, and the potential of its product candidates and proprietary platform. The use of words such as “may,” “could,” “might,” “will,” “should,” “expect,” “plan,” “anticipate,” “believe,” “estimate,” “project,” “intend,” “future,” “potential,” or “continue,” and other similar expressions are intended to identify such forward-looking statements for the purposes of the safe harbor provisions under The Private Securities Litigation Reform Act of 1995. All such forward-looking statements are based on management's current expectations of future events and are subject to a number of risks and uncertainties that could cause actual results to differ materially and adversely from those set forth in or implied by such forward-looking statements. These risks and uncertainties include, without limitation, that preclinical and clinical data, including the results from the Phase 2 trial of apitegromab or Part A or Part B of the Phase 1 trial of SRK-181, are not predictive of, may be inconsistent with, or more favorable than, data generated from future or ongoing clinical trials of the same product candidate, including the Phase 3 clinical trial of apitegromab in SMA and Part B of the Phase 1 clinical trial of SRK-181, respectively, Scholar Rock’s ability to provide the financial support, resources and expertise necessary to identify and develop product candidates on the expected timeline, the data generated from Scholar Rock’s nonclinical and preclinical studies and clinical trials, information provided or decisions made by regulatory authorities, competition from third parties that are developing products for similar uses, Scholar Rock’s ability to obtain, maintain and protect its intellectual property, the success of Scholar Rock’s current and potential future collaborations, Scholar Rock’s dependence on third parties for development and manufacture of product candidates including, without limitation, to supply any clinical trials, Scholar Rock’s ability to manage expenses and to obtain additional funding when needed to support its business activities and establish and maintain strategic business alliances and new business initiatives, as well as those risks more fully discussed in the section entitled "Risk Factors" in Scholar Rock’s Form 10-K for the year ended December 31, 2023, and Quarterly Report on Form 10-Q for the quarter ended March 31, 2024, as well as discussions of potential risks, uncertainties, and other important factors in Scholar Rock’s subsequent filings with the Securities and Exchange Commission. Any forward-looking statements represent Scholar Rock’s views only as of today and should not be relied upon as representing its views as of any subsequent date. All information in this press release is as of the date of the release, and Scholar Rock undertakes no duty to update this information unless required by law. This presentation may also contain estimates and other statistical data made by independent parties and by us relating to market size and growth and other data about our industry. This data involves a number of assumptions and limitations, and you are cautioned not to give undue weight to such estimates. In addition, projections, assumptions, and estimates of our future performance and the future performance of the markets in which we compete are necessarily subject to a high degree of uncertainty and risk. Apitegromab and SRK-181 are investigational drug candidates under evaluation. Apitegromab, SRK-181, and SRK-439 have not been approved for any use by the FDA or any other regulatory agency and the safety and efficacy of apitegromab, SRK-181 and SRK-439 have not been established.

© 2024 Scholar Rock, Inc. All rights reserved. Company Speakers 4 Jay Backstrom, M.D., MPH President & Chief Executive Officer Jing Marantz, M.D., Ph.D. Chief Medical Officer Tracey Sacco Chief Commercial Officer Mo Qatanani, Ph.D. Chief Scientific Officer

© 2024 Scholar Rock, Inc. All rights reserved. Expert Speakers 5 Diana Castro, M.D. Founder of Neurology & Neuromuscular Care Center and Neurology Rare Disease Center Former Associate Professor of Pediatrics, Neurology and Neurotherapeutics, University of Texas Southwestern, Director of the Neuromuscular Program & Fellowship and Director of the Pediatric Muscular Dystrophy Association Clinic at Children’s Health Ania Jastreboff, M.D., Ph.D. Associate Professor of Medicine (Endocrinology), Yale School of Medicine Director, Yale Obesity Research Center (Y-Weight) Co-Director, Yale Center for Weight Management Member of Board of Directors for the American Board of Obesity Medicine

© 2024 Scholar Rock, Inc. All rights reserved. Today’s Agenda 6 Topic Speaker  Welcome Rushmie Nofsinger, VP of IR & Corporate Affairs  Vision & Strategic Overview Jay Backstrom, President & Chief Executive Officer  SMA: The Patient Journey Diana Castro, M.D., Neurology & Neuromuscular Care Center and Neurology Rare Disease Center  Apitegromab: Development Program Jing Marantz, Chief Medical Officer  Apitegromab: Commercial Readiness Tracey Sacco, Chief Commercial Officer Q&A 10-minute Break  Obesity: Muscle Matters Ania Jastreboff, M.D., Ph.D., Yale School of Medicine  SRK-439: Differentiated Approach Mo Qatanani, Chief Scientific Officer  Cardiometabolic Development Program Jing Marantz, Chief Medical Officer Q&A  Closing Remarks Jay Backstrom, President & Chief Executive Officer 8:30 – 12:00

8 TGF β=Transforming growth factor -beta. OUR MISSION To discover, develop, and deliver life -changing therapies by harnessing cutting -edge science to create new possibilities for people living with serious diseases We are a global leader in harnessing the life -changing potential of TGF β biology

© 2024 Scholar Rock, Inc. All rights reserved. Selectivity is the Key The hallmark of our differentiated platform is unparalleled selectivity 1 Large Unmet Needs SMA and obesity represent high value markets offering significant potential revenue opportunities 2 Positioned for Success Experienced team executing on strategy and goals 3 Advancing Our Journey Towards Commercialization 9 W H A T Y O U W I L L H E A R T O D A Y Next 12 – 24 months of execution is expected to be transformative for our company

© 2024 Scholar Rock, Inc. All rights reserved. Evolving into a Fully Integrated Biopharma Company A G E N D A Building a muscle-targeted franchise The road ahead – value drivers Leveraging our proprietary platform 10

© 2024 Scholar Rock, Inc. All rights reserved. Scholar Rock’s Target Latent Growth Factor Traditional Target “Mature” Active Growth Factor Scholar Rock Has Succeeded Where Others Have Failed 11 Targeting the ‘cage’ before growth factor is released allows for exquisite selectivity Has been challenging to target because of high homology across super-family RIGHT TIME Latent Form RIGHT TARGET Validated Biology S E L E C T I V I T Y D R I V E S S U C C E S S

© 2024 Scholar Rock, Inc. All rights reserved. Growing Pipeline Across High Value Therapeutic Areas 12 *Utilized data from previously completed Ph 1 study in healthy volunteers and initiate a Ph 2 POC trial in 2024. LTBP1=Latent transforming growth factor beta binding protein 1; LTBP3=Latent transforming growth factor beta binding protein 3; POC=Proof of concept; RGMc=Repulsive guidance molecule C; TGFβ-1=Transforming growth factor beta-1. TARGET CANDIDATE DISCOVERY/ PRECLINICAL PHASE 1 PHASE 2 PHASE 3 Latent Myostatin SPINAL MUSCULAR ATROPHY Apitegromab CARDIOMETABOLIC DISORDERS Apitegromab in Obesity* SRK-439 (novel anti-myostatin antibody) Latent TGFβ-1 IMMUNO-ONCOLOGY SRK-181 (selective context-independent, anti-latent TGFβ-1) FIBROSIS Selective context-dependent (LTBP1 & LTBP3) anti-latent TGFβ-1 RGMc ANEMIA Selective anti-RGMc Undisclosed NEUROMUSCULAR DISORDERS

Ph 3 SAPPHIRE in SMA Apitegromab additional neuromuscular populations EMBRAZE PoC in obesity Advance SRK-439 to IND Established PoC in ccRCC End of Ph 1 meeting Advance LTBP to IND Nonclinical studies in renal and pulmonary fibrosis High Value Growth Opportunities 13 Neuromuscular Disorders Cardiometabolic Disorders Immuno-Oncology Fibrosis Strong Proprietary Platform

© 2024 Scholar Rock, Inc. All rights reserved. Distinct & High Value Opportunities for Myostatin Inhibition 15 Selective Myostatin Inhibition Apitegromab SRK-439 Therapeutic Area Current Market Size 1 Revenue as of Biogen 4Q23 financial update, Roche 4Q23 financial update, and Novartis 4Q23 financial update 2 Morgan Stanley Research, “Obesity Medication, Ripple Effects.” April 14, 2024 ~$20B2 Obesity Projected to reach $100B by 20302 Ideal for Partnership Spinal Muscular Atrophy $4.5B1 SRRK Commercialization

© 2024 Scholar Rock, Inc. All rights reserved. Global Rights Across the Portfolio 29 patent families pending Exclusivity through 2036 to 2043 for key assets Novel Scientific Platform Robust Pipeline across 5 therapeutic areas 3 clinical programs Multiple preclinical programs Established Markets with High Unmet Need Apitegromab in SMA SRK-439 in Obesity SRK-181 in Immuno-oncology Experienced Team ~150+ Employees ~74% R&D Deep rare disease, R&D, FDA/EMA approval experience Powerful Building Blocks 16 Leveraging Our Building Blocks, Transformative 18 Months Ahead * Subject to regulatory approval

© 2024 Scholar Rock, Inc. All rights reserved. Phase 3 SAPPHIRE Trial Proof of Concept in Obesity Significant Inflection Points in Next Year Preparing to Launch SMA in US and EU* Global Rights Across the Portfolio 29 patent families pending Exclusivity through 2036 to 2043 for key assets Novel Scientific Platform Robust Pipeline across 5 therapeutic areas 3 clinical programs Multiple preclinical programs Established Markets with High Unmet Need Apitegromab in SMA SRK-439 in Obesity SRK-181 in Immuno-oncology Experienced Team ~150+ Employees ~74% R&D Deep rare disease, R&D, FDA/EMA approval experience Value Drivers Powerful Building Blocks 17 Phased approach to building key capabilities Well established presence within SMA Community Leveraging Our Building Blocks, Transformative 18 Months Ahead * Subject to regulatory approval

© 2024 Scholar Rock, Inc. All rights reserved. Near-Term 2024 & 2025 Anticipated Milestones 19 Milestones 2024 2025 SRK-181 data at ASCO • Oral presentation June 3 • Developmental Therapeutics-Immunotherapy SRK-439 data at American Diabetes Association • Oral presentation June 23 • New Insights into Therapeutic Strategies for Obesity and Diabetes EMBRAZE Ph 2a Trial (apitegromab in obesity) • Trial open for enrollment • Topline data expected mid-2025 SAPPHIRE Ph 3 Trial (apitegromab in SMA) • Topline readout in Q4 2024 Potential SMA launch in Q4 2025, if successful & approved Study in SMA Patients < 2 Years of Age • Study design endorsed by EMA’s paediatric committee • Study initiation planned for 2025

© 2024 Scholar Rock, Inc. All rights reserved. Strategic Roadmap: Our Vision for 2030 20 Multi-Billion Dollar Global Neuromuscular Franchise Established in key major markets 5 Clinical Programs Including additional neuromuscular assets Multiple Research Programs Across TGFβ superfamily of growth factors New Targets Leveraging our world-leading antibody engineering capabilities to pursue targets beyond TGFβ superfamily Scholar Rock 2030 Scholar Rock Today Building Commercial Preparedness in US & EU 3 Clinical Programs Multiple Research Programs

© 2024 Scholar Rock, Inc. All rights reserved. From a World-Class Scientific Platform to a World-Class Biopharma Company 21 I N S U M M A R Y PLATFORM PIPELINE PEOPLE Unparalleled selectivity to optimize efficacy and safety Broad opportunities to improve patient outcomes in areas of high unmet need Seasoned research, development and commercial teams Industry-leading anti-myostatin portfolio SMA & Obesity represent significant revenue opportunity

© 2024 Scholar Rock, Inc. All rights reserved. Upcoming Catalyst: Topline Data Expected in Q4 2024 23 A P I T E G R O M A B D E V E L O P M E N T P R O G R A M Where We Were Phase 2 Where We Are Phase 3 12-Month COMPLETE COMPLETE 12-Month IN PROCESS Future 48-Month EXTENSION Long-Term EXTENSION • Q4 2024 data1 • 2025 launch2 1 Anticipated 2 Subject to regulatory approval

© 2024 Scholar Rock, Inc. All rights reserved. Apitegromab for SMA Development Program A G E N D A 24 Evidence supporting apitegromab’s potential Pivotal SAPPHIRE trial: Why we are confident Where we plan to go

© 2024 Scholar Rock, Inc. All rights reserved. 25 Why We Are Confident A P I T E G R O M A B F O R S P I N A L M U S C U L A R A T R O P H Y Selective muscle-targeting designed to improve motor function while minimizing off-target effects >90% patient retention,1 well tolerated profile supports durability of treatment 1. Muscle Targeting 4. TOPAZ Safety Profile Trial design informed by insights from TOPAZ 3. SAPPHIRE Optimized for Success TOPAZ clinical proof-of-concept with substantial and durable effect across broad SMA patients ages 2-21 2. Clinical Proof-Of-Concept 1 Based on TOPAZ patients receiving combination therapy after 4 years of treatment. Data cutoff date: April 2024

© 2024 Scholar Rock, Inc. All rights reserved. * Based on Animal Model Data; 1. Long KK, et al. Hum Mol Genet. 2019;28(7):1077-1088; 2. Pirruccello-Straub M, et al. Sci Reports. 2018;8(1):2292. doi:10.1038/s41598-018-20524-9 3. Figure 26 adapted from: SMA Foundation Overview. http://www.smafoundation.org/wp-content/uploads/2012/03/SMA-Overview.pdf.; Accessed April 18, 2021. For illustrative purposes only Motor neuron degeneration3 Apitegromab Muscle fiber atrophy Selectively Targets Muscle to Address Unmet Needs # 1 S E L E C T I V E M U S C L E T A R G E T I N G Apitegromab is a selective MUSCLE-TARGETED APPROACH designed to improve motor function* 1,2 Myostatin is a negative modulator of muscle growth Evidence indicates upstream targeting of structurally differentiated pro- and latent myostatin minimizes undesirable off-target effects Myostatin Apitegromab

© 2024 Scholar Rock, Inc. All rights reserved. 0.6 1.3 2.3 2.4 0 1 2 3 4 Baseline 6 months 12 months 24 months 36 months 27 Motor Function Improvements Were Substantial & Sustained Over 36 Months n= 35 29 32 29 28 95% CI= (1.4, 4.1) (1.2, 6.0) (1.9, 6.6) (1.0, 6.9) Pooled Nonambulatory Patients Age 2-21 Years All Doses (N=35) 2.8 3.6 4.2 4.0 0 1 2 3 4 5 6 7 Baseline 6 months 12 months 24 months 36 months For the 36-month evaluation, an observed case analysis was conducted, which pooled all the nonambulatory patients (Cohorts 2 and 3) and was based upon the available data for given timepoints. This analysis population included patients receiving either low dose (2 mg/kg) or high dose (20 mg/kg) apitegromab (inclusive of patients in Cohort 3 who switched from 2 mg/kg to 20 mg/kg in Year 2). This analysis excludes data post scoliosis surgery from seven patients. One patient did not conduct HFMSE at time of database lock for 24 months, however, this patient had an unscheduled HFMSE score one month prior to their scheduled visit. In the most recent analysis, this result was included in the 24-month analysis. Error bars represent SE. CI represents confidence interval. SMN Rx=SMN therapy. In the age 2-21 group, 18/28 patients achieved ≥ 1-pt gains, and 11/28 patients ≥ 3-pt gains at 36 months. Data cutoff date as of March 13, 2023. Apitegromab is an investigational drug candidate being evaluated for the treatment of spinal muscular atrophy. Apitegromab has not been approved for any use by the US FDA or any other health authority, and its safety and efficacy have not been established. # 2 P H A S E 2 T O P A Z C L I N I C A L P R O O F - O F - C O N C E P T Mean Change from Baseline (+SE) Age 2-21 Years All Doses (N=35) n= 35 28 31 31 27 95% CI= (-0.2, 1.4) (0.2, 2.3) (1.2, 3.3) (1.1, 3.7) HFMSE RULM Baseline mean age=7.3 | Time on SMN Rx=24.1m Baseline mean age=7.3 | Time on SMN Rx=24.1m Mean Change from Baseline (+SE)

© 2024 Scholar Rock, Inc. All rights reserved. 28 SAPPHIRE Phase 3 Design is Optimized by Insights from TOPAZ # 3 P H A S E 3 S A P P H I R E T R I A L O P T I M I Z E D F O R S U C C E S S TOPAZ Learnings HFMSE=Hammersmith Functional Motor Scale Expanded. *Nonambulatory is defined as unable to independently ambulate without aids or orthotics over 10 steps at time of walk test during screening. SAPPHIRE Trial Design Study Population Age Duration Dose • Substantial HFMSE gains in nonambulatory* patients • Type 2/3 SMA cohorts • Nonambulatory* Type 2/3 SMA patients • Primary efficacy endpoint: HFMSE • Exploratory age 2-12 analysis in nonambulatory Type 2/3 showed transformative potential • Age 2-12 main efficacy population • Age 13-21 exploratory population • HFMSE gains substantial by 12 months of treatment • Clear dose response with greater effect observed with 20 mg/kg over 2 mg/kg • 12-month treatment duration • 20 mg/kg apitegromab dose • 10 mg/kg apitegromab dose

© 2024 Scholar Rock, Inc. All rights reserved. 29 SAPPHIRE Trial Design - Calibrated and Targeted # 3 P H A S E 3 S A P P H I R E T R I A L O P T I M I Z E D F O R S U C C E S S Randomized, double-blind, placebo-controlled (enrolled n=188) Enrolled patients receiving SMN-targeted therapy (nusinersen or risdiplam) Completed enrollment in 3Q 2023 Apitegromab (20 mg/kg IV q4w) Apitegromab (10 mg/kg IV q4w) Placebo (IV q4w) MAIN POPULATION n=156 Ages 2-12 Nonambulatory Types 2/3 SMA N=52 N=52 N=52 R Exploratory Population N = 32, Ages 13-21 2:1 apitegromab 20 mg/kg vs placebo Stratification (across main and exploratory) Age at SMN therapy initiation (age < 5 vs age ≥ 5) SMN-targeted therapy (nusinersen vs. risdiplam) Endpoints Primary Efficacy: Mean HFMSE change from baseline at 12 months Additional Efficacy Measures: RULM, WHO, other outcome measures Safety, PK/PD, ADA Screening Treatment (52 weeks) Nonambulatory is defined as unable to independently ambulate without aids or orthotics over 10 steps at time of walk test during screening

© 2024 Scholar Rock, Inc. All rights reserved. 30 SAPPHIRE – Clear Goals # 3 P H A S E 3 S A P P H I R E T R I A L O P T I M I Z E D F O R S U C C E S S Improved motor function (HFMSE1 and RULM) across broad SMA patients ages 2-21 and regardless of type of SMN-targeted therapy Improved caregiver-reported outcomes (PROMIS-Fatigue and PEDI-CAT) consistent with motor function improvement Safety and tolerability profile that supports long-term use 1 Primary efficacy endpoint of the SAPPHIRE trial Study Aims to Demonstrate

© 2024 Scholar Rock, Inc. All rights reserved. 31 Well Tolerated Safety Profile & Low Discontinuation Rate # 4 T O P A Z S A F E T Y P R O F I L E RIGHT TIME Latent Form Myostatin RIGHT TARGET • >90% of patients on combination therapy remain on study after 4 years of treatment1 • Consistent treatment-emergent adverse events (TEAEs) with previous reports with no new findings after >200 patient years of exposure in SMA2 ‒ Most frequently reported TEAEs included headache, pyrexia, COVID-19, nasopharyngitis, & upper respiratory tract infection ‒ TEAEs were mostly mild to moderate and generally consistent with the underlying patient population and nusinersen therapy • No treatment-related serious AEs or hypersensitivity reactions • No report of positive anti-apitegromab antibodies (ADA) 1 Excludes patients on monotherapy 2 Data cutoff date: April 2024

© 2024 Scholar Rock, Inc. All rights reserved. Apitegromab for SMA Development Program A G E N D A 32 Evidence supporting apitegromab’s potential Pivotal SAPPHIRE trial: Why we are confident Where we plan to go

© 2024 Scholar Rock, Inc. All rights reserved. Evidence from TOPAZ to Support Apitegromab’s Potential in SMA SMN therapies generally plateau after initial gains Substantial HFMSE gains on top of SMN therapy Motor function improvement showed dose response and no clear correlation with nusinersen exposure Caregiver-reported outcomes demonstrated improved fatigue and daily activities High patient retention on study 33 1 2 3 4 5

© 2024 Scholar Rock, Inc. All rights reserved. -2 -1 0 1 2 3 4 Unmet Need to Address Muscle Atrophy 34 Overall population age 2-25 Change in HFMSE* Over Four Years with Risdiplam2 Risdiplam n= 120 120 119 117 109 106 89 99 101 97 Placebo n= 60 60 58 58 Risdiplam Placebo (months 0-12) Mean (+/-SE) Change in HFMSE Total Score From Baseline* Visit, months 0 6 12 18 24 30 36 42 48 Change in HFMSE Over Four Years with Nusinersen1 Overall population age 2-12 Nusinersen n= 84 82 84 84 83 76 83 83 79 61 20 Placebo n= 42 41 41 42 42 39 1 Mercuri E, et al. Presented at: World Muscle Society Congress 2020, P. 257 2 Oskoui M, et al. Presented at: 2021 Muscular Dystrophy Association Clinical & Scientific Conference; March 15-18, 2021. Poster 80. HFMSE, Hammersmith Functional Motor Scale–Expanded; SE, standard error. *MFM was primary efficacy endpoint of SUNFISH. HFMSE was a secondary endpoint. This third-party information is provided for background only and is not intended to convey or imply a comparison to the TOPAZ clinical trial results. # 1 S M N T H E R A P I E S : H F M S E S C O R E S G E N E R A L L Y P L A T E A U A F T E R I N I T I A L G A I N S Mean (+SE) Change in HFMSE Total Score From Baseline Initial Treatment CHERISH Chronic Maintenance Phase SHINE -4 -2 0 2 4 6 8 1 92 169 253 350 450 690 930 1170 1410 1650 Nusinersen in CHERISH and SHINE Sham control in CHERISH Analysis Visit, days

© 2024 Scholar Rock, Inc. All rights reserved. 35 Motor Function Gains Were Substantial & Sustained Over 36 Months # 2 S U B S T A N T I A L H F M S E G A I N S W I T H A P I T E G R O M A B O N T O P O F S M N T H E R A P Y n= 35 29 32 29 28 95% CI= (1.4, 4.1) (1.2, 6.0) (1.9, 6.6) (1.0, 6.9) Age 2-21 Years All Doses (N=35) 2.8 3.6 4.2 4.0 0 1 2 3 4 5 6 7 Baseline 6 months 12 months 24 months 36 months HFMSE Baseline mean age=7.3 | Time on SMN Rx=24.1m Mean Change from Baseline (+SE) • Patients enrolled in the TOPAZ study had received nusinersen for a mean of ~2 years, well into the steady maintenance phase • HFMSE gain stands above outcomes observed well into the plateau phase of nusinersen treatment For the 36-month evaluation, an observed case analysis was conducted, which pooled all the nonambulatory patients (Cohorts 2 and 3) and was based upon the available data for given timepoints. This analysis population included patients receiving either low dose (2 mg/kg) or high dose (20 mg/kg) apitegromab (inclusive of patients in Cohort 3 who switched from 2 mg/kg to 20 mg/kg in Year 2). This analysis excludes data post scoliosis surgery from seven patients. One patient did not conduct HFMSE at time of database lock for 24 months, however, this patient had an unscheduled HFMSE score one month prior to their scheduled visit. In the most recent analysis, this result was included in the 24-month analysis. Error bars represent SE. CI represents confidence interval. SMN Rx=SMN therapy. In the age 2-21 group, 18/28 patients achieved ≥ 1-pt gains, and 11/28 patients ≥ 3-pt gains at 36 months. Data cutoff date as of March 13, 2023. Apitegromab is an investigational drug candidate being evaluated for the treatment of spinal muscular atrophy. Apitegromab has not been approved for any use by the US FDA or any other health authority, and its safety and efficacy have not been established.

© 2024 Scholar Rock, Inc. All rights reserved. Motor Function Improvement Mainly Attributable to Apitegromab 36 HFMSE, Hammersmith Functional Motor Scale Expanded. Dose response graph: Crawford TO, et al. Neurology. 2024; 102 (5). Scatter plot of prior nusinersen treatment duration vs change in HFMSE from baseline, a post-hoc analysis in nonambulatory. Types 2 and 3 participants in TOPAZ. Patients skipped 3 or more doses due to COVID-site restrictions excluded;. Apitegromab is an investigational product candidate under development. -5 0 5 10 15 20 0 4 8 12 16 20 24 28 32 36 40 Change in HFMSE from Baseline Duration of Previous Nusinersen Exposure (Months) # 3 H F M S E S H O W E D D O S E R E S P O N S E A N D N O C L E A R C O R R E L A T I O N W I T H D U R A T I O N O F P R I O R N U S I N E R S E N • Dose response observed in HFMSE in nonambulatory ≥Age 2 group randomized to 2 mg/kg and 20 mg/kg in a double-blind fashion • Both arms showed early benefit with a greater latency of the low dose arm, supporting that the effect is mainly attributable to apitegromab • Patients enrolled were already in the chronic maintenance phase of nusinersen (mean prior exposure ~2 years) where motor function generally plateaus • Lack of clear correlation between 12-month HFMSE & duration of prior nusinersen exposure in patients aged 2 – 21 suggests motor function improvement mainly attributable to apitegromab Lack of Correlation Suggests Improvement Attributable to Apitegromab Clear Benefit Attributable to Apitegromab 0 2 4 6 8 Baseline 8 16 24 32 40 Month 12 endpoint Time (weeks) Change from Baseline of HFMSE Score Apitegromab 2 mg/kg Apitegromab 20 mg/kg 10 10 10 10 10 10 7 8 8 8 8 8 9 8 2 mg/kg 20 mg/kg Apitegromab sample size at each visit

© 2024 Scholar Rock, Inc. All rights reserved. 37 Time (weeks) No. of observations Time (weeks) No. of observations IMPROVEMENT Change from baseline ( ±SE) -8 -7 -6 -5 -4 -3 -2 -1 0 1 2 0 0 8 16 24 32 40 52 68 84 104 120 136 156 -2 -1 0 1 2 3 4 5 0 0 8 16 24 32 40 52 68 84 104 120 136 156 Year 1 Year 2 Year 3 31 29 30 21 23 25 25 27 22 23 16 15 17 IMPROVEMENT N = 35; Baseline mean age=7.3 | Time on SMN Rx=24.1m Change from baseline ( ±SE) Year 1 Year 2 Year 3 25 23 22 19 19 22 16 18 19 19 16 14 14 Caregivers Report Improved Self-Sufficiency and Fatigue # 4 C A R E G I V E R - R E P O R T E D O U T C O M E S D E M O N S T R A T E D I M P R O V E D F A T I G U E A N D D A I L Y A C T I V I T I E S PEDI-CAT Daily Activities PROMIS Fatigue (Proxy) Autonomy: “She is able to access a lot of her world way more than she was able to [before the trial]." Fine Motor Skills: “She can take lids off markers on her own. She is able to use crayons…She can brush her own teeth and dress Barbie.” Motor improvements: “…since the trial she’s been able to go from lying down to sitting on her own, to getting into the sitting position.” Independence: “She has more recently gained the ability to crawl. She can get into the crawling position on her own and move across the room, and stand on her own…” HFMSE=Hammersmith Functional Motor Scale Expanded; OC=observed case; PEDI-CAT=Pediatric Evaluation of Disability Inventory Computer Adaptive Test; PROMIS=Patient Reported Outcome Measurement Information System; RULM=Revised upper limb module; SE=standard error of the mean. SMN Rx=SMN therapy. Data on File. Scholar Rock, Inc. Cambridge, MA. Data cutoff date as of March 13, 2023. The updated PEDI-CAT analysis included additional records (2 at 12 months and 1 at 24 months) that were not available at the time of previous analysis. Apitegromab is an investigational drug candidate being evaluated for the treatment of spinal muscular atrophy. Apitegromab has not been approved for any use by the US FDA or any other health authority, and its safety and efficacy have not been established. 1 Pokrzywinski R et al. Presented at AAN, 2024. 2 Data on file, Scholar Rock, Inc.

© 2024 Scholar Rock, Inc. All rights reserved. • 57 enrolled • 8 discontinued: 2 due to COVID-19 concerns; 1 due to work schedule, 5 on monotherapy due to perceived lack of benefit • >90% of patients on combination therapy remain on study with 4 years of treatment1 • 58 enrolled • 57 completed primary treatment period and enrolled in the extension study • 1 withdrew consent >90 Percent of Patients on Combination Therapy Remain on Study 38 # 5 H I G H P A T I E N T R E T E N T I O N O N S T U D Y Primary Treatment (12 Months) Extension Phase TOPAZ Safety Profile 1Excludes patients on monotherapy. Data cutoff date: April 2024 *Nonambulatory is defined as unable to independently ambulate without aids or orthotics over 10 steps at time of walk test during screening. ~94% (33/35) of nonambulatory* patients remain on study with 4 years of treatment

© 2024 Scholar Rock, Inc. All rights reserved. Apitegromab for SMA Development Program A G E N D A 39 Evidence supporting apitegromab’s potential Pivotal SAPPHIRE trial: Why we are confident Where we plan to go

© 2024 Scholar Rock, Inc. All rights reserved. Where We Plan to Go: Expanding to Benefit More People Living with SMA *Pending approval 40 2024 2025 Q4 Data Readout • BLA /MAA Filing • Regulatory Approval* • Study in SMA Patients < 2 Years of Age ‒ Study design endorsed by EMA’s paediatric committee ‒ Study initiation planned for 2025 A P I T E G R O M A B D E V E L O P M E N T P R O G R A M

© 2024 Scholar Rock, Inc. All rights reserved. Advancing a Novel Muscle-Targeted Therapy for SMA 41 I N S U M M A R Y • High confidence based on proof-of-concept data in SMA • Q4 pivotal readout with potential 2025 regulatory approval & commercialization • Studies planned to support additional indications for apitegromab

© 2024 Scholar Rock, Inc. All rights reserved. Our Purpose: Create Possibilities for Those Living with SMA 44 Muscle is everything. I want to live knowing that I have the strength to take care of myself if left alone. - Lyza

© 2024 Scholar Rock, Inc. All rights reserved. Listening to the Customer Voice to Stay Focused on Our Purpose 45 Building Deep Insights • >15 market research and insights projects with US, EU, and UK participants  250+ caregivers of or people living with SMA  340+ HCPs, including both neurologists and physical therapists  60+ payer insights • Ongoing discussions with SMA patient advocacy organizations and SMA treaters Source: Scholar Rock Internal Research 2022-2024 HCP=Healthcare Professional

© 2024 Scholar Rock, Inc. All rights reserved. SMA Has Evolved – Today Patients are Diagnosed, Treated, and Surviving Longer • Newborn screening leading to earlier treatment • Broad and expanding global access to treatment • Concentrated care in US and EU • Engaged and organized global patient advocacy 46 SMA Has Evolved Cure SMA Care Center Network Sources: https://www.curesma.org/sma-care-center-network accessed April 22, 2024; https://odysma.sma-europe.eu accessed April 22, 2024; Internal Scholar Rock market research

© 2024 Scholar Rock, Inc. All rights reserved. Patient Demand, HCP Feedback, and Payer Proactivity Suggest: More is Still Needed Sources: Cure SMA. Education on adult patient expectations according to copy number and disease status at time of report. September 2022. Internal Scholar Rock market research; Managed Markets Insight & Technology, LLC *As measured by covered lives; coverage for SMA approved therapy following demonstrated decline post-treatment with SMA approved gene therapy 47 Patient Demand Physician Feedback Payer Proactivity % of patients who identified improvement in muscle strength as what they seek most from a new treatment in SMA % of US commercial lives whose plan already covers combination SMA therapy* 97% % of SMA patients for whom HCPs would prescribe a muscle targeted therapy >70% ⅓

© 2024 Scholar Rock, Inc. All rights reserved. Progressive Muscle Weakness Remains a Core Unmet Need 48 Personal hygiene, using the toilet and the shower on my own would be huge. My four-year-old can do it on her own. It’s degrading. – US Patient Patients treated with [nusinersen and risdiplam] are receiving only modest benefit. We need to restore motor function that enables practical improvement in daily activities / independence. – National MCO Source: Internal Scholar Rock market research HFMSE = Hammersmith Functional Motor Scale Extended; MCO = Managed Care Organization Muscle atrophy and loss of strength is a key issue in these patients. Increasing a patients’ HFMSE score is really important. Its measurable and meaningful. – Pediatric Neurologist (UK)

© 2024 Scholar Rock, Inc. All rights reserved. 1. 2. 3. 4. SMA is the Right Opportunity for Scholar Rock’s First Launch 49 Clear Unmet Need Concentrated and Proactive Care Engaged Patient Community Payer Receptivity • Patient, HCP, and payer communities recognize remaining needs in SMA • Patients already diagnosed and treated proactively • High concentration of care • Established value of improving motor function • Proactive advocacy, patient, and caregiver community • Aligned on need for muscle targeted therapy

© 2024 Scholar Rock, Inc. All rights reserved. Why We Are Confident About Potential Commercial Success of Apitegromab 51 Gold standard efficacy measure in SMA • HFMSE is a SMA-specific, validated functional scale • Commonly used in practice by both HCPs and payers Long-term treatment experience in SMA patients • SMA patients treated >4 years on apitegromab1 • High retention rate in TOPAZ Fits into current SMA practice • Used with nusinersen or risdiplam • Monthly dosing 1 Ph 2 TOPAZ trial (apitegromab in SMA), data as of April 2024 HFMSE = Hammersmith Functional Motor Scale Extended

© 2024 Scholar Rock, Inc. All rights reserved. SMA Represents a Significant Opportunity for Apitegromab 52 ~$4.5B1 global revenue for three SMN targeted therapies Apitegromab global revenue potential >$1.0B2 1 Revenue as of Biogen 4Q23 financial update, Roche 4Q23 financial update, and Novartis 4Q23 financial update 2 Scholar Rock internal estimates as of May 2024 SMA=Spinal muscular atrophy; SMN=Survival motor neuron.

© 2024 Scholar Rock, Inc. All rights reserved. Commercialization Approach: Three Key Elements 53 1. Engagement 2. Patient Experience 3. Execution • Partnering with SMA communities • Ensure excellent patient experience • Build team to deliver US launch & global expansion Commercialization Plan

© 2024 Scholar Rock, Inc. All rights reserved. Partnering With the SMA Community 54 1 . E N G A G E M E N T • MSL team on the ground • Continued engagement with US and EU patient advocacy © 2024 Scholar Rock, Inc. All rights reserved. MSL= Medical Science Liaison • Amplify patient voice with muscle-focused education

© 2024 Scholar Rock, Inc. All rights reserved. Secure Access and Customize Treatment to Meet Patient Needs 55 2 . P A T I E N T E X P E R I E N C E Optimize Treatment Experience Ensure Access Provide Support Vision for Patient Experience Engage payers early and focus on value demonstration Design for maximum flexibility to enable seamless integration into practice Customize patient services to meet patient and HCP needs throughout treatment journey

© 2024 Scholar Rock, Inc. All rights reserved. Building to Achieve Commercial Success 56 3 . E X E C U T I O N Geographic Expansion • Commercialize in selected European countries* • Remaining EU and ROW expansion through distributorships & partnerships U.S. Launch* • Expand commercial capabilities • Efficient US customer facing footprint (30-50 FTEs) Building the Foundation • Focused and experienced team • Launch, rare disease, and SMA experience 2024 2025 2026+ * Subject to regulatory approval ROW= Rest of world

© 2024 Scholar Rock, Inc. All rights reserved. Path to Achieving Commercial Success in SMA 57 I N S U M M A R Y  Clear unmet need and favorable market dynamics  Competitive and attractive potential profile  Engagement, patient-focus & execution The right market The right medicine The right plan Apitegromab global revenue potential >$1.0B1 1 Scholar Rock internal estimates as of May 2024

© 2024 Scholar Rock, Inc. All rights reserved. A Differentiated Approach A G E N D A Different approaches to muscle preservation SRK-439: novel asset, differentiated profile 59 Best-in-class platform for selectivity

© 2024 Scholar Rock, Inc. All rights reserved. Differentiated Approach to Targeting Growth Factors 60 S E L E C T I V I T Y D R I V E S S U C C E S S Transformational Medicines Deep structural insights to validated targets Industry-leading antibody design and protein engineering to selectively target latent growth factors Optimized for efficacy and avoids off-target effects Advantages of Scholar Rock’s Approach Traditional Target “Mature” active growth factor Growth factor Scholar Rock’s Target Latent growth factor Precursor complex Precursor complex Highly selective monoclonal antibodies

© 2024 Scholar Rock, Inc. All rights reserved. Platform and Expertise Drive Success in Clinic 61 Superb Engineering Clinic SRK-439 IND in 2025 SRK-181 Anti-PD1 Anti-PD1/ SRK-181-mIgG1 T R A N S L A T I O N A L S U C C E S S T O T H E C L I N I C Apitegromab Muscle stimulation (Hz) Muscle strength (torque) Translational Models Treatment Treatment

© 2024 Scholar Rock, Inc. All rights reserved. A Differentiated Approach A G E N D A Different approaches to muscle preservation SRK-439: novel asset, differentiated profile 62 Best-in-class platform for selectivity

© 2024 Scholar Rock, Inc. All rights reserved. Muscle is Critical for Overall Health 1. Aristizabal JC et al. Eur J Clin Nutr 2015; 2. Lindegaard B et al. J Clin Endocrinol Metab 2008; 3. Srikanthan P, Karlamangla AS J Clin Endocrinol Metab 2011; 4. Severinsen et al. Endocr Rev. 2020; 5. Wewege MA, et al. Sport Med 2022; 6. Zurlo F. et al. J Clin Invest 1990; 7. Fukushima Y et al. Diabetes Metab J. 2016; 8. Roh E, Choi KM. Front. Endocrinol. 2020; 9. Volpi E, et al Curr Opin Clin Nutr Metab Care. 2004 63 Signal to other systems as an endocrine organ impacting overall health4 Reduce visceral fat5 Increase bone density, strength, function, and longevity and decreased risk of injury and disability7-9 Increase caloric expenditure post-exercise6 Enhance glucose homeostasis2 and better insulin sensitivity and lower risk of prediabetes3 Increase basal metabolic rate (BMR)1 K E Y M E T A B O L I C O R G A N

© 2024 Scholar Rock, Inc. All rights reserved. Advantages Myostatin is the Right Target for Muscle Growth Myostatin is specific to muscle1 Validated genetically with no evident safety liabilities 1-4 Inhibition leads to muscle growth in adults5 Selective targeting leads to improved motor function as seen in TOPAZ with favorable tolerability profile observed in >200 patient years of exposure in SMA 6 Pictures depict increase in muscle mass in myostatin null animals and humans 1. McPherron, A.C., et al. Nature 1997; 2. Schuelke, M., et al. NEJM 2004; 3. Kambadur, R., et al Genome Res. 1997; 4. Mosher, D.S., et al. PLoS 2007; 5. Abati E, et al. Cell Mol Life Sci. 2022; 6. Ph 2 TOPAZ trial (apitegromab in SMA), data as of April 2024 64 I N D U C I N G M U S C L E G R O W T H

© 2024 Scholar Rock, Inc. All rights reserved. Signaling receptor shared by Myostatin, GDF-11 & Activin A Multiple Risks Associated with Non-Selective Targeting 1. Barrett et al., Adv Therapy 2021; 2. Crawford et al., Neurology 2024; 3. Garito T et al Clin Endocrinol 2018; 4. Amato AA et al Neurology 2021; 5. Heymsfield SB et al. JAMA 2021; 6. Vanhoutte F et al. J Clin Pharmacol 2020; 7. Attie KM et al Muscle Nerve 2013; 8. Attie KM et al Am J Hematol 2014; 9. Campbell C et al. Muscle Nerve 2017; 10. Hoeper MM et al NEJM 2023; 11. Ruckle J et al, JBMR 2009; 12. Sherman ML et al J Clin Pharm 2013; 13. Muntoni F et al. Neurol Ther. 2024. 14. Rocco MD et al Nat Med 2023; 65 Promyostatin Pro-GDF-11 Proactivin GDF-11 Activin A ActRIIA/B Apitegromab SRK-439 Other Approaches • GI problems, e.g., diarrhea, pancreatitis 3-6 • Nose bleeds (epistaxis), low platelet count, telangiectasias7-10 • Reduction in reproductive hormones in males and females3, 7, 11, 12 • Acne, rash, skin abscesses5, 13, 14 • Madarosis (loss of eyebrows or eyelashes)14 Favorable safety profile1,2 S E L E C T I V I T Y T O M Y O S T A T I N I S C R I T I C A L Health Risks Observed with Non-Selective Inhibition of ActRII Pathway: Myostatin

© 2024 Scholar Rock, Inc. All rights reserved. A Differentiated Approach A G E N D A Different approaches to muscle preservation SRK-439: novel asset, differentiated profile 66 Best-in-class platform for selectivity

© 2024 Scholar Rock, Inc. All rights reserved. Why We Are Confident in SRK-439 67 • A new anti-myostatin specifically suited for obesity • Targets pro and latent forms of myostatin designed to minimize undesirable off-target effects • Preclinical data demonstrated favorable muscle mass preservation and metabolic effects Scholar Rock’s Unique Approach Exquisite Selectivity Strong Scientific Validation

© 2024 Scholar Rock, Inc. All rights reserved. SRK-439: Differentiated Profile 68 Exquisite selectivity for myostatin Potential for healthier weight loss in combination with GLP-1 RA Low efficacious dose and competitive profile 1 3 2

© 2024 Scholar Rock, Inc. All rights reserved. SRK-439 Selectively Binds Latent Myostatin Scholar Rock’s Target: Latent Myostatin SRK-439: Exquisite Selectivity for Myostatin 69 # 1 S E L E C T I V E F O R M Y O S T A T I N • Increasing SRK-439 concentrations lead to increased signal of binding to myostatin with no signal observed for GDF-11 or Activin A “mature” myostatin Latent myostatin Human Latent Myostatin Human Latent GDF-11 Human Latent Activin A 0.001 0.01 0.1 1 10 100 1000 0.0 0.5 1.0 1.5 2.0 2.5 SRK-439 (nM) Binding Intensity (OD450)

© 2024 Scholar Rock, Inc. All rights reserved. SRK-439: Potential for Healthier Weight Loss Management in Combination with GLP-1 RA 70 # 2 C O M B I N A T I O N G L P - 1 R A D A T A I N O B E S I T Y M O D E L S • Considerable lean mass loss with semaglutide treatment • Combination with SRK-439 led to dose-dependent lean mass preservation ‒ Effects seen with doses as low as 0.3 mg/kg • Dose dependent enhancement of fat mass loss also observed, improving overall body composition Key Observations -15 -10 -5 0 5 10 15 SRK-439 Maintains Lean Mass Percent Change Lean Mass from Baseline 0.1 0.3 1 3 Control + Sema Control SRK-439 Treatment ✱ ✱✱✱✱ SRK-439 (mg/kg) + Semaglutide (0.04mg/kg) p < 0.05 p < 0.0001 SRK-439 Maintained Lean Mass in Semaglutide Treated Animals Study conducted in Diet Induced Obesity (DIO) mouse model utilizing a murine chimera of SRK-439 GLP-1 RA: GLP1 receptor agonist

© 2024 Scholar Rock, Inc. All rights reserved. 0 50 100 150 200 250 SRK-439 Further Improvement in Fasting Glucose in SemaglutideTreated Animals Fasting Glucose (mg/dL) 0.1 0.3 1 3 Control + Sema Control SRK-439 Treatment ✱ ✱ ✱ SRK-439: Further Improvement of Metabolic Health 71 # 2 C O M B I N A T I O N G L P - 1 R A D A T A I N O B E S I T Y M O D E L S Key Observations SRK-439 Further Improved Fasting Glucose in Semaglutide Treated Animals • Semaglutide reduced fasting glucose levels as expected • Combination with SRK-439 led to further improvement in fasting glucose levels by ~20% in a dose-dependent manner • Highlights the role of muscle preservation in improving long term metabolic profile SRK-439 (mg/kg) + Semaglutide (0.04mg/kg) p < 0.05 p < 0.05 p < 0.05 Study conducted in Diet Induced Obesity (DIO) mouse model utilizing a murine chimera of SRK-439

© 2024 Scholar Rock, Inc. All rights reserved. Are We Limiting Efficacy with Selective Targeting of Myostatin? 72 S E L E C T I V I T Y T O M Y O S T A T I N I S C R I T I C A L Signaling receptor shared by Myostatin, GDF-11 & Activin A Promyostatin Pro-GDF-11 Proactivin GDF-11 Activin A ActRIIA/B Apitegromab SRK-439 Other Approaches Myostatin

© 2024 Scholar Rock, Inc. All rights reserved. SRK-439: More Potent than Anti-ActRII Antibody at Maintaining Lean Mass 73 # 3 L O W E F F I C A C I O U S D O S E A N D C O M P E T I T I V E P R O F I L E Head-to-Head Comparison to Non-Selective Myostatin Inhibitor in DIO Mouse Model -20 -15 -10 -5 0 Percent Change Lean Mass from Baseline ✱ ✱ ✱✱✱✱ ✱✱✱✱ ✱✱✱✱ ✱✱✱✱ 0.3 1 3 10 0.3 1 3 20 Antibody Treatment (mg/kg) + Semaglutide (0.04mg/kg) SRK-439 Anti-ActRII* p < 0.01 p < 0.0001 p < 0.0001 p < 0.0001 p < 0.0001 •SRK-439 preserved GLP-1 driven lean mass loss dose-dependently and at lower doses than anti-ActRII •Highlights efficacy of SRK-439 and avoids potential liabilities of non-selective approach •Low target dose of SRK-439 supports subcutaneous profile Key Observations *Murine chimera of Bimagrumab Study conducted in Diet Induced Obesity (DIO) mouse model utilizing a murine chimera of SRK-439

© 2024 Scholar Rock, Inc. All rights reserved. SRK-439: Best in Class Potential 74 SRK-439 ActRII Ab Ligand Trap Adnectin Selectivity for myostatin Action limited to muscle Combination GLP-1 RA data in obesity preclinical models1-3 Low efficacious dose in preclinical obesity models1-3 Lower risk of potential undesirable effects in clinic4 X X X X X X X X X X X X GLP-1 RA: GLP1 receptor agonist 1. Nunn E, et al., Mol Metab 2024; 2. Schang G., et al, J. Endoc Soc 2023; 3. Ackerman, P, et al. Obesity Week 2023 Poster 211; 4. See also references on slide titled, “Multiple Risks Associated with Non-Selective Targeting” in this presentation.

© 2024 Scholar Rock, Inc. All rights reserved. SRK-439: The Right Molecule for Healthy Weight Loss 75 I N S U M M A R Y  Highly selective approach  Targets muscle  Efficacy without potential liabilities of non-selective approaches  Designed for subcutaneous low frequency dosing with robust subcutaneous exposure and long half life The right target The right tissue The right safety profile The right product profile

© 2024 Scholar Rock, Inc. All rights reserved. Significant Proportion of Weight Loss Due to Loss of Lean Muscle Mass 78 L O S S O F L E A N M U S C L E S I G N I F I C A N T W I T H G L P - 1 A G O N I S T T H E R A P Y GLP-1 Agonist=Glucagon-like peptide-1 receptor agonist 1. Muller TD, et al Anti-obesity drug discovery: advances and challenges. Nature Reviews Drug Discovery 2022; 21, 201–223; 2. Wilding JPH, Batterham RL, Calanna S, et al. Once-Weekly Semaglutide in Adults with Overweight or Obesity. N Engl J Med. 2021;384(11):989-1002; 3. Jastreboff AM, et al Tirzepatide Once Weekly for the Treatment of Obesity. NEJM 2022; 387 (3): 205-216; Current weight loss strategies challenged by: Tolerability Significant muscle loss1-3 Lack of durability Lean muscle loss

© 2024 Scholar Rock, Inc. All rights reserved. Lean Muscle Is Essential to Healthy Metabolic Function 79 L O S S O F L E A N M U S C L E S I G N I F I C A N T W I T H G L P - 1 A G O N I S T T H E R A P Y GLP-1 Agonist=Glucagon-like peptide-1 receptor agonist 1. Aristizabal JC, Freidenreich DJ, Volk BM, et al. Effect of resistance training on resting metabolic rate and its estimation by a dual-energy X-ray absorptiometry metabolic map. Eur J Clin Nutr.2015; 69, 831–836. https://doi.org/10.1038/ejcn.2014.216; 2. Lindegaard B, Hansen T, Hvid T, et al. The effect of strength and endurance training on insulin sensitivity and fat distribution in human immunodeficiency virus-infected patients with lipodystrophy. J Clin Endocrinol Metab. 2008; 93:3860–9; 3. Srikanthan P, Karlamangla AS. Relative muscle mass is inversely associated with insulin resistance and prediabetes. Findings from the third National Health and Nutrition Examination Survey. J Clin Endocrinol Metab. 2011; 96:2898–903. doi: 10.1210/jc.2011-0435; 4. Wewege MA, Desai I, Honey C, et al. The effect of resistance training in healthy adults on Body fat percentage, fat mass and visceral fat: A systematic review and meta-analysis. Sports Med. 2022(Feb);52(2):287-300. doi: 10.1007/s40279-021-01562-2; 5. Zurlo, F., Larson, K., Bogardus, C., et al. Skeletal muscle metabolism is a major determinant of resting energy expenditure. J Clin Invest. 1990;86(5), 1423-1427; 6. Fukushima Y, Kurose S, Shinno H, et al. Importance of lean muscle maintenance to improve insulin resistance by body weight reduction in female patients with obesity. Diabetes Metab J. 2016;40: 147-153; 7. Roh E, Choi KM. Health consequences of sarcopenic obesity: a narrative review. Front. Endocrinol. 2020;11: 332; 8. Volpi E, Nazemi R, Fujita S. Muscle tissue changes with aging. Curr Opin Clin Nutr Metab Care. 2004;7(4): 405-410. Better insulin sensitivity and lower risk of prediabetes3 Reduced visceral fat4 Increased bone density, strength, function, longevity, and decreased risk of injury and disability6-8 Increased caloric expenditure post-exercise5 Enhanced glucose homeostasis2 Increased basal metabolic rate1

© 2024 Scholar Rock, Inc. All rights reserved. Potential Benefits Our Solution Delivers Attractive Clinical Risk/Benefit Profile 80 • Inhibition of myostatin, a negative regulator of muscle, is known to promote muscle growth and function • Apitegromab, a selective myostatin inhibitor, has been shown in a Phase 2 Proof-of-Concept study to improve motor function • Preserving muscle, an endocrine organ with important role in energy metabolism, has the potential to improve durability of weight loss • Selective targeting minimizes off-target effects, potentially supporting long-term use for healthy weight management T H E R A P E U T I C P O T E N T I A L O F O U R M U S C L E - T A R G E T E D A P P R O A C H I N O B E S I T Y Preserving muscle Improving function Improving durability Long-term safety Key Points

© 2024 Scholar Rock, Inc. All rights reserved. 82 Apitegromab in SMA Improved Motor Function from Baseline C A R D I O M E T A B O L I C D E V E L O P M E N T P R O G R A M n= 35 29 32 29 28 95% CI= (1.4, 4.1) (1.2, 6.0) (1.9, 6.6) (1.0, 6.9) Age 2-21 Years Pooled Nonambulatory Patients (N=35) 2.8 3.6 4.2 4.0 0 1 2 3 4 5 6 7 Baseline 6 months 12 months 24 months 36 months HFMSE Gain Baseline mean age=7.3 | Time on SMN Rx=24.1m Mean Change from Baseline (+SE) 0 2 4 6 8 Baseline 8 16 24 32 40 Month 12 endpoint Time (weeks) Change from Baseline of HFMSE Score Apitegromab 2 mg/kg Apitegromab 20 mg/kg 10 10 10 10 10 10 7 8 8 8 8 8 9 8 2 mg/kg 20 mg/kg Apitegromab sample size at each visit Dose Response in HFMSE TOPAZ nonambulatory Cohort 3 patients randomized to 2 mg/kg and 20 mg/kg in a double-blind fashion HFMSE, Hammersmith Functional Motor Scale Expanded. Dose response graph: Crawford TO, et al. Neurology. 2024; 102:e209151 Apitegromab has not been approved for any use by the US FDA or any other health authority, and its safety and efficacy have not been established.

© 2024 Scholar Rock, Inc. All rights reserved. Leveraging Apitegromab POC Study to Inform SRK-439 Development 83 C A R D I O M E T A B O L I C D E V E L O P M E N T P R O G R A M Tests hypothesis of selective anti-myostatin in obese population POC study start* POC data readout* Ph 2 proof-of-concept trial APITEGROMAB + GLP-1 Agonist 2024 2025 SAPPHIRE Topline Q4* Potential Commercial Launch* APITEGROMAB SMA Spinal Muscular Atrophy IND* SRK-439 + GLP-1 Agonist Novel asset for cardiometabolic indication Phase 1 trial Cardiometabolic Disorders Expected timelines POC = Proof of Concept

© 2024 Scholar Rock, Inc. All rights reserved. 84 Effect of apitegromab to preserve lean mass in obese or overweight patients receiving a GLP-1 agonist Safety and tolerability data to provide initial support for long-term chronic use Explore the potential effect of apitegromab to improve metabolic profile and physical function EMBRAZE Proof-of-Concept Study C A R D I O M E T A B O L I C D E V E L O P M E N T P R O G R A M Insights gained from EMBRAZE study to inform SRK-439 development Study Aims to Demonstrate

© 2024 Scholar Rock, Inc. All rights reserved. Launching Phase 2 Proof-of-Concept Study of Apitegromab in Obesity 85 E M B R A Z E T R I A L D E S I G N Randomized, double-blind, placebo-controlled (n=100) Enrolling patients who are overweight or obese Enrollment expected to start in 2Q 2024 Screening (Up to 4 weeks) • Male or female, age ≥18 and ≤65 years old at the time of informed consent • Stable body weight within 90 days of Screening • BMI ≥30.0 kg/m2 to ≤45.0 kg/m2 or ≥27.0 kg/m2 to <30.0 kg/m2 with the presence of 1 or more weight-related comorbid condition(s) ENDPOINTS Primary Endpoint (Week 24) Change from baseline in lean mass by DEXA scan Secondary Endpoints Additional weight loss measures, safety & tolerability, PK/PD Treatment (24 weeks) Apitegromab Q4W + tirzepatide or semaglutide* QW Placebo Q4W + tirzepatide or semaglutide* QW ADDITIONAL Exploratory Endpoints (Week 24 and 32) Cardiometabolic profile (e.g., HbA1c), body composition, physical function R N=50 N=50 8 weeks (24 weeks) Primary endpoint (32 weeks) Exploratory endpoints *Participating patient will be assigned to either tirzepatide or semaglutide depending on availability. Apitegromab dose regimen will be 10 mg/kg Q4W, based on projected exposure in the obese population comparable to that of 20 mg/kg Q4W in SMA Tirzepatide and semaglutide dose regimen will follow the United States Prescribing Information.

© 2024 Scholar Rock, Inc. All rights reserved. FDA Guidelines Added Clinical Benefit 86 Regulatory Pathway C A R D I O M E T A B O L I C D E V E L O P M E N T P R O G R A M *Clinical Outcome Assessment: Frequently Asked Questions: https://www.fda.gov/about-fda/clinical-outcome-assessment-coa-frequently-asked-questions#Consideration1 A clinical outcome assessment is a measure that describes or reflects how a patient feels, functions, or survives.* Incremental Clinical Benefit Incremental Weight Loss • Current weight management drugs approved based on total body weight loss • Incremental weight loss as primary endpoint – preservation of lean mass may lead to additional weight loss incremental to that mediated by GLP-1 agonist • Increased muscle mass has the potential to improve metabolic profile (e.g., HbA1c) • Preserving lean body mass is expected to improve physical function • FDA guidance supports combination strategy • Need to demonstrate the added clinical benefit of the combination

© 2024 Scholar Rock, Inc. All rights reserved. Platform and Expertise Drive Success in Clinic 87 T R A N S L A T I O N A L S U C C E S S T O T H E C L I N I C Apitegromab SRK-181 SRK-439 Anti-PD1 Anti-PD1/ SRK-181-mIgG1 Muscle stimulation (Hz) Muscle strength (torque) Differentiated Engineering Translational Models Clinic IND in 2025

© 2024 Scholar Rock, Inc. All rights reserved. 88 Cardiometabolic Program Has Key Ingredients For Success I N S U M M A R Y : A D I F F E R E N T I A T E D A P P R O A C H Regulatory Path Forward FDA guidance supports combination strategy; SRK-439 development has the potential to improve function & incremental weight loss Leverages Apitegromab Study First and only anti-myostatin to show clinical proof of concept, apitegromab’s study in obesity informs SRK-439 development SRK-439 Designed for Obesity Specificity minimizes off-target effects; effect in translational models on preservation of lean mass, enhanced fat loss, & improved metabolic profile SRK-439 IND in 2025

© 2024 Scholar Rock, Inc. All rights reserved. Selectivity is the Key The hallmark of our differentiated platform is unparalleled selectivity 1 Large Unmet Needs SMA and obesity represent high value markets offering significant potential revenue opportunities 2 Positioned for Success Experienced team executing on strategy and goals 3 Advancing Our Journey Towards Commercialization 90 I N S U M M A R Y Next 12 – 24 months of execution is expected to be transformative for our company